APPLICATION OF BIOINFORMATICS TOOLS TO CHECK MUTATION AND EVOLUTION POTENTIAL OF CHICKPEA CHOLOROTIC DWARF VIRUS (CpCDV) INFECTING COTTON AND HOST PLANTS

M ATIF; F AHMAD; MT MANZOOR; K GILANI; Q ALI; M SARWAR; S ANJUM; MW ALAM; A HUSSAIN

doi:10.54112/bcsrj.v2022i1.116

Authors

M ATIF Department of Plant Pathology, Faculty of Agricultural Sciences, University of the Punjab, Lahore, Pakistan
F AHMAD School of Food Sciences and Technology, Minhaj University Lahore, Pakistan
MT MANZOOR Department of Plant Pathology, Faculty of Agricultural Sciences, University of the Punjab, Lahore, Pakistan
K GILANI Institute of Molecular Biology and Biotechnology, The University of Lahore, Lahore Pakistan
Q ALI Department of Plant Breeding and Genetics, Faculty of Agricultural Sciences, University of the Punjab Lahore, Pakistan
M SARWAR Department of Horticulture, Faculty of Agricultural Sciences, University of the Punjab Lahore, Pakistan
S ANJUM Department of Botany, University of the Punjab, Lahore, Pakistan
MW ALAM Department of Plant Pathology, University of Okara, Okara, Pakistan
A HUSSAIN Department of Agronomy, Faculty of Agricultural Sciences, University of the Punjab, Lahore, Pakistan

DOI:

https://doi.org/10.54112/bcsrj.v2022i1.116

Keywords:

abiotic, mutations, genome, pathogen, geminiviruses

Abstract

The Chickpea Chlorotic Dwarf Virus (CpCDV) has been proved highly destructive not only for the chickpea crop but also for lentils, cotton and papaya. It has been found 95% reduction in yield due to attacks of mastrevirus. This virus has been reported to be identified from dry regions as well as an equally important plant pathogen throughout the world especially in America and Europe. Vector species also played an important role in the spread of this virus. Here evolutionary study of 27 viral genomes was carried put. All genomes obtained from
tomato crop are ancestors and rest has been found as the offsprings. According to our finding, CpCDV is very important pathogen not only for Fabaceae family but also for Malvaceae, Solanaceae and Cucurbitaceae family.

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